Position Description:

Department Summary:

ZFIN, the Zebrafish Information Network, located at the University of Oregon (UO) in Eugene, is seeking a scientific curator to join our dynamic, interactive team of biologists and computer scientists. ZFIN supports the international zebrafish research community by curating zebrafish genetic, genomic, gene expression, phenotype, disease model and gene function data and providing access to this data via web interfaces, APIs and data downloads.

Zebrafish are one of several model organisms studied extensively by scientists around the world to understand fundamental biology. ZFIN has recently joined forces with 5 other model organism databases to form the Alliance of Genome Resources, a large consortium of scientists and developers spread across more than ten institutions in Europe and North America. The Alliance of Genome Resources (www.alliancegenome.org) is designed to facilitate the use of model organisms in research and aims to provide a unified platform to access harmonized model organism data to further the understanding of the genetic and genomic basis of human biology, health and disease.

Working as a ZFIN scientific curator, as well as contributing to integration and harmonization of zebrafish data at the Alliance of Genome resources, you will have an excellent opportunity to contribute to the scientific knowledgebase of the international zebrafish research community.

Position Summary:

ZFIN, the Zebrafish Information Network, seeks a scientific curator to join our dynamic, interactive team of biologists and computer scientists at the University of Oregon in Eugene, Oregon.

Scientific curation is the process of translating scientific knowledge from research articles into databases where disparate pieces of scientific data are integrated to generate scientific knowledgebases that help propel research forward and is an attractive career path for creative scientists looking to take their career in a digital direction.

As a ZFIN scientific curator you will:

• Attend and present posters and talks at scientific meetings.
• Integrate data from external resources, such as the whole genome sequence, with curated data available in ZFIN.
• Actively contribute to the integration of zebrafish research data at the Alliance of Genome Resources, alliancegenome.org.
• Read the latest zebrafish literature and add published data, including mutants, gene expression, phenotype, human disease model, and gene ontology data to the ZFIN database.
• Collaborate with computer scientists to facilitate cross-species comparisons and strengthen the link between zebrafish research data and the understanding of human disease.
• Work with research laboratories to incorporate direct data submissions into ZFIN.
• Work with computer scientists to develop ZFIN web pages to increase access to scientific data.
• Contribute to the production of ZFIN publications and grants.

This is a funding contingent career faculty appointment that will be filled at the Research Assistant or Associate level based on qualifications and experience.

For more information about ZFIN and this position, please visit: zfin.org

Qualifications:

Research Associate rank:

• Ph.D. degree in life sciences.

Professional Competencies:

• Ability to meet deadlines and take responsibility for delivering timely software and data releases.
• Ability to be flexible with quickly changing business needs and new technologies.
• Strong attention to detail.
• Effective communication skills.
• Ability to work effectively independently as well as on cross-functional teams.
• Ability to handle multiple complex tasks simultaneously with minimal oversight.
• Strong analytical, problem-solving, and troubleshooting skills.
• Significant research expertise in developmental genetics.
• Ability to work at a computer the majority of the time.

Preferred Qualifications:

• Basic skills in a scripting language such as Perl or Python.
• Experience with major biological databases (NCBI, model organism databases, Ensembl, UniProt, etc.).
• Relocation to Eugene is preferred, but not required.
• Ph.D. in life sciences.
• Familiarity with ontologies such as anatomy ontologies, gene ontology, etc.
• Experience with bioinformatics tools (e.g. BLAST).

To Apply:

Please apply for this position on the University of Oregon Careers site (https://careers.uoregon.edu/cw/en-us/job/530365/scientific-curator-zfin). Applications must be either in PDF or a MS Word readable format; other formats will be ignored.

University of Oregon students and employees are required to be vaccinated against COVID-19. For additional information see: https://hr.uoregon.edu/uo-covid-19-vaccination-requirement-employee-process.

The University of Oregon is proud to offer a robust benefits package to eligible employees, including health insurance, retirement plans and paid time off. For more information about benefits, visit http://hr.uoregon.edu/careers/about-benefits.

The University of Oregon is an equal opportunity, affirmative action institution committed to cultural diversity and compliance with the ADA. The University encourages all qualified individuals to apply, and does not discriminate on the basis of any protected status, including veteran and disability status. The University is committed to providing reasonable accommodations to applicants and employees with disabilities. To request an accommodation in connection with the application process, please contact us at [email protected] or 541-346-5112.

UO prohibits discrimination on the basis of race, color, sex, national or ethnic origin, age, religion, marital status, disability, veteran status, sexual orientation, gender identity, and gender expression in all programs, activities and employment practices as required by Title IX, other applicable laws, and policies. Retaliation is prohibited by UO policy. Questions may be referred to the Title IX Coordinator, Office of Civil Rights Compliance, or to the Office for Civil Rights. Contact information, related policies, and complaint procedures are listed on the statement of non-discrimination.

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